Materials Learning Algorithms

CASUS Institute Seminar

Molecular logic of cellular mesoscale systems in physiology & disease

CASUS Institute Seminar, Dr. Hari Raj Singh, Postdoctoral Researcher, Tony Hyman Lab, Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany

Abstract of the talk// Cells are the fundamental units of life, yet how they organize their internal components into dynamic, functional architectures remains one of biology’s most profound open questions. Hari’s research seeks to uncover and predict how such organization emerges at the mesoscale, the level between molecules and whole cells where biological decision-making arises.

During his PhD at LMU, Munich, he investigated how chromatin remodellers integrate molecular signals with mesoscale organization. He discovered that the oncogene ALC1 (Amplified in Liver Cancer 1) is an auto-inhibited enzyme activated by DNA damage-induced poly-ADP-ribose (PAR) signalling, revealing how modular allostery enables robust DNA damage responses and offers druggable opportunities.

Building on this foundation, his postdoctoral research at the MPI-CBG in Dresden explores how biomolecular condensates govern protein function through mesoscale organization, and how their disruption leads to human disease. Using a systematic screen of the TRIM ubiquitin ligase family, the team finds that many TRIM proteins exhibit global mesoscale organization through dynamic condensates. Through in cellulo condensatography, it charts nuclear TRIM condensation and characterizes TRIM8 syndrome, a neuro-renal disorder caused by C-terminal intrinsically disordered region (IDR) truncations. These mutations disrupt condensate formation, proteasomal regulation, and NFκB signalling, leading to podocyte dysfunction. Remarkably, IDR complementation restores condensate formation and rescues cellular signalling. Additionally, Hari and colleagues developed PICNIC, a machine learning classifier that predicts condensate-forming proteins independent of structural disorder, providing a powerful tool for the broader scientific community. These findings establish a multi-scale framework for understanding human condensatopathies, linking molecular sequence, cellular organization, and physiological function.

CV// Hari Raj Singh is a molecular cell biologist integrating multi-scale data to uncover mechanisms of genetic syndromes and condensate biology using imaging, synthetic biology, and artificial intelligence. His current focus is on mesoscale cellular organization in physiology, disease, and evolution. Hari’s PhD work on ALC1 chromatin remodeller inspired a startup in Munich. He co-discovered TRIM8 syndrome, a novel human genetic condensatopathy, and co-developed the PICNIC tool for predicting condensate-forming proteins. His research aims to decode and reprogram the molecular logic of cellular organization, bridging molecular biology, biophysics, computation, and engineering.

Hari Raj Singh will be talking live in Görlitz. However, as the event is organized in a hybrid format that includes a videoconferencing tool by Zoom Inc., people not present in Görlitz and interested in the topic have the chance to also join the talk. Please ask for the login details via contact@casus.science.

venue

date

CASUS – Center for Advanced Systems Understanding, Conrad-Schiedt-Str. 20, D-02826 Görlitz, Deutschland

11 December 2025, 11 am